libStatGen Software
1
Loading...
Searching...
No Matches
Here is a list of all documented variables with links to the class documentation for each member:
base2complement :
BaseAsciiMap
base2int :
BaseAsciiMap
baseColor2int :
BaseAsciiMap
baseNIndex :
BaseAsciiMap
baseXIndex :
BaseAsciiMap
color2int :
BaseAsciiMap
depth :
glfEntry
INDEX_NA :
Cigar
int2base :
BaseAsciiMap
int2colorSpace :
BaseAsciiMap
lk :
glfEntry
mapQuality :
glfEntry
myHasHeader :
SamFile
myIsBamOpenForRead :
SamFile
myIsOpenForRead :
SamFile
myIsOpenForWrite :
SamFile
myPrevCoord :
SamFile
myRecordCount :
SamFile
myStatistics :
SamFile
myStatus :
SamFile
NO_REF_ID :
SamReferenceInfo
offset :
glfEntry
REF_ID_ALL :
BamIndex
REF_ID_UNMAPPED :
BamIndex
refBase :
glfEntry
UNKNOWN_NUM_READS :
BamIndex
UNKNOWN_QUALITY_CHAR :
BaseUtilities
UNKNOWN_QUALITY_INT :
BaseUtilities
Generated by
1.9.8